STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM48398.1Pyrrolo-quinoline quinone; COG4993 Glucose dehydrogenase. (591 aa)    
Predicted Functional Partners:
EDM48387.1
COG1454 Alcohol dehydrogenase, class IV.
    
 0.973
EDM48594.1
COG1064 Zn-dependent alcohol dehydrogenases.
   
 
 0.970
EDM47170.1
COG1454 Alcohol dehydrogenase, class IV.
     
 0.969
EDM48740.1
Putative betaine aldehyde dehydrogenase (badh) oxidoreductase protein; COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
   
 
 0.968
EDM48400.1
Cytochrome c550, putative; COG2010 Cytochrome c, mono- and diheme variants.
 
 
 0.943
EDM48399.1
Periplasmic binding protein, putative; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
 
  
 0.904
EDM48402.1
YVTN beta-propeller repeat family protein.
 
 
 0.894
EDM48394.1
COG1012 NAD-dependent aldehyde dehydrogenases; Belongs to the aldehyde dehydrogenase family.
  
 
 0.880
pqqB
Pyrroloquinoline quinone biosynthesis protein PqqB; May be involved in the transport of PQQ or its precursor to the periplasm; Belongs to the PqqB family.
 
  
 0.876
pqqC
Pyrroloquinoline quinone biosynthesis protein C; Ring cyclization and eight-electron oxidation of 3a-(2-amino- 2-carboxyethyl)-4,5-dioxo-4,5,6,7,8,9-hexahydroquinoline-7,9- dicarboxylic-acid to PQQ.
 
  
 0.861
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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