STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM48409.1Putative sulfonate ABC transporter, periplasmic sulfonate-binding protein; COG0715 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components. (339 aa)    
Predicted Functional Partners:
EDM48408.1
Aliphatic sulfonates transport permease protein, putative; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
 
 
 0.984
EDM48407.1
ABC transporter related protein; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
 0.949
EDM46364.1
Putative nitrate transporter; COG0600 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component.
  
 
 0.810
EDM48403.1
ABC efflux transporter, ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
  
 0.805
EDM48401.1
Hypothetical protein.
 
   
 0.793
EDM48402.1
YVTN beta-propeller repeat family protein.
 
    0.791
EDM45821.1
Nitrate transport ATP-binding subunits C and D; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
  
 
 0.783
EDM48404.1
ABC efflux transporter, permease protein; COG0842 ABC-type multidrug transport system, permease component.
 
     0.776
EDM48398.1
Pyrrolo-quinoline quinone; COG4993 Glucose dehydrogenase.
 
   
 0.768
EDM48399.1
Periplasmic binding protein, putative; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
  
  
  0.741
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.