STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM47799.1Hypothetical protein. (387 aa)    
Predicted Functional Partners:
EDM47798.1
Hypothetical protein.
 
     0.956
EDM47800.1
Hypothetical protein.
 
     0.943
EDM47796.1
Hypothetical protein.
 
   
 0.939
EDM47802.1
Hypothetical protein; COG0457 FOG: TPR repeat.
 
     0.939
EDM47801.1
Protein containing tetratricopeptide repeats; COG0457 FOG: TPR repeat.
 
     0.934
EDM47795.1
COG3807 Uncharacterized protein conserved in bacteria.
 
     0.921
EDM47794.1
Hypothetical protein; COG0823 Periplasmic component of the Tol biopolymer transport system.
 
     0.908
EDM47797.1
COG0526 Thiol-disulfide isomerase and thioredoxins.
 
     0.876
EDM47808.1
Hypothetical protein.
 
     0.862
EDM47806.1
COG0848 Biopolymer transport protein.
 
     0.861
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
Server load: low (22%) [HD]