STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM49079.1COG2923 Uncharacterized protein involved in the oxidation of intracellular sulfur. (116 aa)    
Predicted Functional Partners:
EDM49078.1
Hypothetical protein; COG2168 Uncharacterized conserved protein involved in oxidation of intracellular sulfur.
  
 0.999
EDM49080.1
Hypothetical protein; COG1553 Uncharacterized conserved protein involved in intracellular sulfur reduction.
 
 0.999
EDM49077.1
Dissimilatory sulfite reductase (desulfoviridin), gamma subunit; Part of a sulfur-relay system.
 
  
 0.874
EDM48462.1
COG3529 Predicted nucleic-acid-binding protein containing a Zn-ribbon domain.
  
     0.691
EDM49599.1
Hypothetical protein; COG5256 Translation elongation factor EF-1alpha (GTPase).
  
     0.686
EDM49099.1
COG1366 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor).
  
     0.609
EDM49081.1
COG0670 Integral membrane protein, interacts with FtsH; Belongs to the BI1 family.
       0.587
EDM48942.1
COG3317 Uncharacterized lipoprotein.
  
     0.546
EDM46511.1
Rod shape-determining protein MreC, subtype; COG1007 NADH:ubiquinone oxidoreductase subunit 2 (chain N).
  
     0.524
EDM47367.1
Transcriptional regulator MvaT, P16 subunit.
  
     0.519
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.