STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM49240.1Type II secretory pathway, component PulL; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins. (434 aa)    
Predicted Functional Partners:
EDM49239.1
Type II secretory pathway, component PulM; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.998
EDM47490.1
COG0845 Membrane-fusion protein.
 
 
 0.966
EDM49247.1
Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
 
 
 0.953
EDM49242.1
General secretion pathway protein J; COG4795 Type II secretory pathway, component PulJ.
 
   
 0.929
EDM49241.1
COG3156 Type II secretory pathway, component PulK.
 
  
 0.920
EDM49244.1
General secretion pathway protein H; COG2165 Type II secretory pathway, pseudopilin PulG.
 
  
 0.915
EDM47402.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 
 0.906
EDM46715.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 
 0.906
EDM47485.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
  
 
 0.906
EDM49243.1
General secretion pathway protein I; COG2165 Type II secretory pathway, pseudopilin PulG.
 
  
 0.905
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.