STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM49412.1COG5517 Small subunit of phenylpropionate dioxygenase. (164 aa)    
Predicted Functional Partners:
EDM49413.1
Benzoate 1,2-dioxygenase hydroxylase component,alpha subunit; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
 0.997
EDM48643.1
Ring-hydroxylating dioxygenase, alpha subunit; COG4638 Phenylpropionate dioxygenase and related ring-hydroxylating dioxygenases, large terminal subunit.
 
 0.992
EDM49411.1
Benzoate 1,2-dioxygenase electron transfer component Includes: Ferredoxin; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
 
 0.981
fabG-3
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.971
fabG-4
3-ketoacyl-(acyl-carrier-protein) reductase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
 
 0.939
EDM48641.1
Oxidoreductase FAD/NAD(P)-binding domain protein; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
 
 0.932
EDM47942.1
Oxidoreductase FAD-binding region; COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
 
 0.872
EDM47241.1
COG0543 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases.
 
 
 0.868
EDM48645.1
COG4829 Muconolactone delta-isomerase.
 
  
 0.867
EDM48644.1
Catechol 1,2-dioxygenase; COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
 
  
 0.840
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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