STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM49782.1Hypothetical protein; COG3823 Glutamine cyclotransferase. (208 aa)    
Predicted Functional Partners:
EDM49783.1
Hypothetical protein.
 
     0.931
EDM49799.1
COG4312 Uncharacterized protein conserved in bacteria.
 
     0.731
EDM49781.1
Hypothetical protein; COG0188 Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit.
       0.594
EDM49784.1
COG4642 Uncharacterized protein conserved in bacteria.
       0.589
EDM49785.1
COG4430 Uncharacterized protein conserved in bacteria.
       0.589
EDM49787.1
COG1174 ABC-type proline/glycine betaine transport systems, permease component.
 
     0.589
EDM49790.1
COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
 
     0.575
EDM47021.1
COG0277 FAD/FMN-containing dehydrogenases.
    
   0.562
glcE
Glycolate oxidase FAD binding subunit; COG0277 FAD/FMN-containing dehydrogenases.
    
   0.562
EDM48168.1
Glycolate oxidase subunit D; COG0277 FAD/FMN-containing dehydrogenases.
    
   0.562
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.