STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM49785.1COG4430 Uncharacterized protein conserved in bacteria. (187 aa)    
Predicted Functional Partners:
EDM49784.1
COG4642 Uncharacterized protein conserved in bacteria.
       0.773
EDM49786.1
Probable transporter, LysE family protein; COG1280 Putative threonine efflux protein.
       0.697
EDM49787.1
COG1174 ABC-type proline/glycine betaine transport systems, permease component.
       0.697
EDM49788.1
COG1125 ABC-type proline/glycine betaine transport systems, ATPase components.
       0.697
EDM49783.1
Hypothetical protein.
       0.686
EDM49790.1
COG1732 Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein).
       0.652
EDM49789.1
COG1174 ABC-type proline/glycine betaine transport systems, permease component.
       0.649
EDM49782.1
Hypothetical protein; COG3823 Glutamine cyclotransferase.
       0.589
EDM46977.1
COG3795 Uncharacterized protein conserved in bacteria.
 
     0.526
EDM49791.1
COG1714 Predicted membrane protein/domain.
 
     0.492
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.