Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM46285.1 | EDM47898.1 | MDG893_13514 | MDG893_14950 | Glycosyl transferase, family 9; COG0859 ADP-heptose:LPS heptosyltransferase. | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | 0.410 |
EDM46286.1 | EDM47898.1 | MDG893_13519 | MDG893_14950 | Hypothetical protein; COG0419 ATPase involved in DNA repair. | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | 0.410 |
EDM47897.1 | EDM47898.1 | MDG893_14945 | MDG893_14950 | Extracellular solute-binding protein, family 5; COG0747 ABC-type dipeptide transport system, periplasmic component. | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | 0.477 |
EDM47897.1 | EDM47899.1 | MDG893_14945 | MDG893_14955 | Extracellular solute-binding protein, family 5; COG0747 ABC-type dipeptide transport system, periplasmic component. | LrgA; COG1380 Putative effector of murein hydrolase LrgA. | 0.477 |
EDM47898.1 | EDM46285.1 | MDG893_14950 | MDG893_13514 | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | Glycosyl transferase, family 9; COG0859 ADP-heptose:LPS heptosyltransferase. | 0.410 |
EDM47898.1 | EDM46286.1 | MDG893_14950 | MDG893_13519 | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | Hypothetical protein; COG0419 ATPase involved in DNA repair. | 0.410 |
EDM47898.1 | EDM47897.1 | MDG893_14950 | MDG893_14945 | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | Extracellular solute-binding protein, family 5; COG0747 ABC-type dipeptide transport system, periplasmic component. | 0.477 |
EDM47898.1 | EDM47899.1 | MDG893_14950 | MDG893_14955 | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | LrgA; COG1380 Putative effector of murein hydrolase LrgA. | 0.986 |
EDM47898.1 | EDM47900.1 | MDG893_14950 | MDG893_14960 | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | COG4681 Uncharacterized protein conserved in bacteria. | 0.553 |
EDM47898.1 | EDM48090.1 | MDG893_14950 | MDG893_03415 | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | LrgA; COG1380 Putative effector of murein hydrolase LrgA. | 0.951 |
EDM47899.1 | EDM47897.1 | MDG893_14955 | MDG893_14945 | LrgA; COG1380 Putative effector of murein hydrolase LrgA. | Extracellular solute-binding protein, family 5; COG0747 ABC-type dipeptide transport system, periplasmic component. | 0.477 |
EDM47899.1 | EDM47898.1 | MDG893_14955 | MDG893_14950 | LrgA; COG1380 Putative effector of murein hydrolase LrgA. | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | 0.986 |
EDM47899.1 | EDM47900.1 | MDG893_14955 | MDG893_14960 | LrgA; COG1380 Putative effector of murein hydrolase LrgA. | COG4681 Uncharacterized protein conserved in bacteria. | 0.553 |
EDM47900.1 | EDM47898.1 | MDG893_14960 | MDG893_14950 | COG4681 Uncharacterized protein conserved in bacteria. | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | 0.553 |
EDM47900.1 | EDM47899.1 | MDG893_14960 | MDG893_14955 | COG4681 Uncharacterized protein conserved in bacteria. | LrgA; COG1380 Putative effector of murein hydrolase LrgA. | 0.553 |
EDM48090.1 | EDM47898.1 | MDG893_03415 | MDG893_14950 | LrgA; COG1380 Putative effector of murein hydrolase LrgA. | LrgB-like protein; COG1346 Putative effector of murein hydrolase. | 0.951 |