STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM46116.1COG3333 Uncharacterized protein conserved in bacteria. (499 aa)    
Predicted Functional Partners:
EDM46117.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.961
EDM46126.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.888
EDM47112.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.871
EDM47963.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.838
EDM47920.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.836
EDM47925.1
Hypothetical protein; COG2358 TRAP-type uncharacterized transport system, periplasmic component.
 
  
 0.835
EDM47960.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.827
EDM48212.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.813
EDM47967.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.809
EDM47923.1
COG3181 Uncharacterized protein conserved in bacteria.
 
  
 0.807
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.