Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM45904.1 | EDM46612.1 | MDG893_20254 | MDG893_19434 | Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria. | OmpA domain protein transmembrane region-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | 0.725 |
EDM45904.1 | EDM46761.1 | MDG893_20254 | MDG893_06640 | Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.773 |
EDM45904.1 | EDM46897.1 | MDG893_20254 | MDG893_13364 | Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria. | COG1388 FOG: LysM repeat. | 0.773 |
EDM45904.1 | EDM48117.1 | MDG893_20254 | MDG893_03550 | Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.760 |
EDM45904.1 | EDM48739.1 | MDG893_20254 | MDG893_17027 | Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria. | Putative transcriptional regulator. | 0.642 |
EDM45904.1 | EDM49139.1 | MDG893_20254 | MDG893_07075 | Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.658 |
EDM45904.1 | EDM49271.1 | MDG893_20254 | MDG893_07735 | Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG1196 Chromosome segregation ATPases. | 0.793 |
EDM45904.1 | EDM49311.1 | MDG893_20254 | MDG893_07935 | Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG0517 FOG: CBS domain. | 0.771 |
EDM45904.1 | EDM49545.1 | MDG893_20254 | MDG893_10106 | Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.763 |
EDM45904.1 | EDM49713.1 | MDG893_20254 | MDG893_10946 | Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria. | COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.751 |
EDM46612.1 | EDM45904.1 | MDG893_19434 | MDG893_20254 | OmpA domain protein transmembrane region-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Probable membrane protein YdgA-like protein; COG5339 Uncharacterized protein conserved in bacteria. | 0.725 |
EDM46612.1 | EDM46761.1 | MDG893_19434 | MDG893_06640 | OmpA domain protein transmembrane region-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein. | 0.728 |
EDM46612.1 | EDM46897.1 | MDG893_19434 | MDG893_13364 | OmpA domain protein transmembrane region-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | COG1388 FOG: LysM repeat. | 0.816 |
EDM46612.1 | EDM48117.1 | MDG893_19434 | MDG893_03550 | OmpA domain protein transmembrane region-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein. | 0.662 |
EDM46612.1 | EDM48739.1 | MDG893_19434 | MDG893_17027 | OmpA domain protein transmembrane region-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Putative transcriptional regulator. | 0.599 |
EDM46612.1 | EDM49139.1 | MDG893_19434 | MDG893_07075 | OmpA domain protein transmembrane region-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein. | 0.483 |
EDM46612.1 | EDM49271.1 | MDG893_19434 | MDG893_07735 | OmpA domain protein transmembrane region-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein; COG1196 Chromosome segregation ATPases. | 0.716 |
EDM46612.1 | EDM49311.1 | MDG893_19434 | MDG893_07935 | OmpA domain protein transmembrane region-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein; COG0517 FOG: CBS domain. | 0.643 |
EDM46612.1 | EDM49545.1 | MDG893_19434 | MDG893_10106 | OmpA domain protein transmembrane region-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | Hypothetical protein. | 0.649 |
EDM46612.1 | EDM49713.1 | MDG893_19434 | MDG893_10946 | OmpA domain protein transmembrane region-containing protein; COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins. | COG3210 Large exoproteins involved in heme utilization or adhesion. | 0.559 |
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