STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM46624.1COG2261 Predicted membrane protein. (80 aa)    
Predicted Functional Partners:
EDM46625.1
Hypothetical protein; COG3788 Uncharacterized relative of glutathione S-transferase, MAPEG superfamily.
       0.785
EDM46622.1
COG3764 Sortase (surface protein transpeptidase).
 
     0.550
EDM46623.1
COG0204 1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
       0.523
EDM47236.1
Response regulator receiver domain protein (CheY-like); COG3279 Response regulator of the LytR/AlgR family.
   
    0.505
EDM48581.1
Hypothetical protein.
  
    0.440
EDM48745.1
Organic hydroperoxide resistance protein; COG1764 Predicted redox protein, regulator of disulfide bond formation.
   
    0.426
EDM46621.1
COG2304 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain.
       0.425
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.