STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EDM47659.1Isrso16-transposase orfa protein; COG2801 Transposase and inactivated derivatives. (88 aa)    
Predicted Functional Partners:
EDM47658.1
Isrso16-transposase orfb protein; COG2801 Transposase and inactivated derivatives.
  
 0.814
EDM48050.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
   
 0.755
EDM48363.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
   
 0.668
EDM49176.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
   
 0.668
EDM46803.1
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
   
 0.668
EDM47660.1
Hypothetical protein.
       0.566
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.