STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM47773.1Hypothetical protein. (170 aa)    
Predicted Functional Partners:
EDM47774.1
Deoxynucleotide monophosphate kinase, putative; COG0237 Dephospho-CoA kinase.
       0.701
EDM47769.1
Hypothetical protein.
       0.470
EDM47770.1
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
       0.470
EDM47771.1
Hypothetical protein.
       0.470
EDM47772.1
Lysozyme, putative; COG3772 Phage-related lysozyme (muraminidase).
       0.470
EDM47775.1
Hypothetical protein.
       0.433
EDM47776.1
Hypothetical protein.
       0.433
EDM47777.1
Hypothetical protein.
       0.433
EDM47778.1
Hypothetical protein; COG0484 DnaJ-class molecular chaperone with C-terminal Zn finger domain.
       0.433
EDM47780.1
Hypothetical protein.
       0.433
Your Current Organism:
Marinobacter algicola
NCBI taxonomy Id: 443152
Other names: M. algicola DG893, Marinobacter algicola DG893, Marinobacter algicola str. DG893, Marinobacter algicola strain DG893, Marinobacter sp. DG893
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.