STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO57671.1Pimeloyl-ACP methyl ester carboxylesterase. (277 aa)    
Predicted Functional Partners:
SDO57787.1
Transcriptional regulator PadR-like family protein.
 
     0.871
SDO57720.1
DoxX-like family protein.
 
     0.832
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
   
  0.706
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
   
  0.694
SDO95355.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.691
SDP72526.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
   
 
  0.673
SDP67165.1
Concanavalin A-like lectin/glucanases superfamily protein.
  
     0.563
SDP73448.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.508
SDP03028.1
Hypothetical protein.
  
     0.484
SDP67192.1
RHS repeat-associated core domain-containing protein.
  
     0.479
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.