STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO63026.1Hypothetical protein. (243 aa)    
Predicted Functional Partners:
SDO62972.1
Predicted NAD/FAD-binding protein.
  
 0.996
SDO63073.1
Cyclopropane-fatty-acyl-phospholipid synthase.
    0.995
SDO63125.1
Cyclopropane-fatty-acyl-phospholipid synthase.
    0.993
SDO63177.1
Steroid 5-alpha reductase family enzyme.
 
     0.955
SDO90850.1
Cyclopropane-fatty-acyl-phospholipid synthase.
    0.935
SDP59071.1
Alpha/beta hydrolase family protein.
  
     0.612
SDO62909.1
Protein of unknown function.
       0.580
SDO63222.1
RNA polymerase sigma-70 factor, ECF subfamily.
       0.516
SDO63272.1
Hypothetical protein.
       0.516
SDO62870.1
DNA-binding transcriptional regulator, MerR family.
     
 0.511
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.