STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO69071.1Putative glutamine amidotransferase. (258 aa)    
Predicted Functional Partners:
SDO68940.1
Glutamine synthetase.
 
 
 0.937
SDP13729.1
Membrane dipeptidase.
      0.906
SDP02583.1
Glutamate synthase (NADH) large subunit.
    
  0.891
SDO69033.1
NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family.
 
     0.845
SDO68996.1
Acyl-CoA reductase; Belongs to the aldehyde dehydrogenase family.
 
  0.817
SDO68900.1
Transcriptional regulator, GntR family.
 
     0.741
SDO68736.1
Amino acid transporter.
 
    0.649
SDO68854.1
4-methylaminobutanoate oxidase (formaldehyde-forming); Belongs to the GcvT family.
  
    0.648
SDO81837.1
L-glutamine synthetase.
  
 
 0.597
SDP08342.1
Glutamine synthetase.
  
 
 0.597
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.