STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO76859.1Lysophospholipase L1. (236 aa)    
Predicted Functional Partners:
SDO76893.1
N-hydroxyarylamine O-acetyltransferase.
       0.773
SDP53195.1
Fibronectin type III domain-containing protein.
  
 
   0.661
SDP16028.1
MT0933-like antitoxin protein.
   
  0.636
SDP30014.1
MT0933-like antitoxin protein.
   
  0.636
SDP50248.1
Calcineurin-like phosphoesterase.
   
  0.636
SDP69419.1
Dihydroneopterin aldolase / 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase; Catalyzes the conversion of 7,8-dihydroneopterin to 6- hydroxymethyl-7,8-dihydropterin.
    
  0.576
SDO60369.1
Polyketide cyclase / dehydrase and lipid transport.
  
     0.526
SDP58912.1
Ig-like domain (group 3).
  
 
   0.495
SDP18622.1
TrbL/VirB6 plasmid conjugal transfer protein.
  
 
   0.481
SDP61316.1
Hypothetical protein.
  
 
   0.462
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.