STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO79578.1Deazaflavin-dependent oxidoreductase, nitroreductase family. (145 aa)    
Predicted Functional Partners:
SDP27841.1
LPPG:FO 2-phospho-L-lactate transferase.
  
   
 0.773
SDO98327.1
Probable F420-dependent oxidoreductase, MSMEG_2906 family.
  
   
 0.768
SDO97249.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
   
 0.756
SDP47991.1
Luciferase-like monooxygenase.
  
   
 0.756
fgd
Coenzyme F420-dependent glucose-6-phosphate dehydrogenase; Catalyzes the coenzyme F420-dependent oxidation of glucose 6- phosphate (G6P) to 6-phosphogluconolactone.
  
   
 0.753
SDO69688.1
2-phospho-L-lactate guanylyltransferase.
  
   
 0.749
SDO61217.1
Adenylyltransferase and sulfurtransferase.
  
  0.715
SDP27873.1
Coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase.
  
     0.713
SDP29209.1
Probable F420-dependent oxidoreductase, Rv1855c family.
  
   
 0.710
SDP62585.1
Sulfide:quinone oxidoreductase.
   
  0.703
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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