STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO80127.1Thiosulfate/3-mercaptopyruvate sulfurtransferase. (302 aa)    
Predicted Functional Partners:
SDO80090.1
Cysteine desulfuration protein SufE; Manually curated.
 
     0.950
SDP10832.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
  
  
 
0.855
SDO99271.1
Sulfite reductase (ferredoxin); Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
   
 0.838
SDP22210.1
Cysteine desulfurase.
   
 0.834
SDO99192.1
Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.828
SDO61217.1
Adenylyltransferase and sulfurtransferase.
   
 0.817
SDP57950.1
Thiol-disulfide isomerase or thioredoxin.
    
  0.789
SDP62143.1
Thiol-disulfide isomerase or thioredoxin.
    
  0.789
SDP71419.1
Thiol-disulfide isomerase or thioredoxin.
    
  0.789
SDP47894.1
DMSO/TMAO reductase YedYZ, molybdopterin-dependent catalytic subunit.
 
  
 0.787
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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