STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO82121.1Cellobiose ABC transporter membrane protein. (311 aa)    
Predicted Functional Partners:
SDO82026.1
Cellobiose-binding protein.
 
 0.987
SDP44667.1
Carbohydrate ABC transporter ATP-binding protein, CUT1 family; Belongs to the ABC transporter superfamily.
 0.984
SDO82061.1
Cellobiose transport system permease protein; Manually curated.
0.982
SDO97825.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.971
SDP65065.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.970
SDP51577.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.969
SDP31445.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
  0.938
SDO86026.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 0.928
SDP58298.1
Carbohydrate ABC transporter membrane protein 1, CUT1 family.
 
  0.921
SDO97902.1
Carbohydrate ABC transporter substrate-binding protein, CUT1 family.
 
 0.915
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.