Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO84234.1 | SDO85602.1 | SAMN04489867_0728 | SAMN04489867_0764 | DNA polymerase-3 subunit epsilon. | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | 0.888 |
SDO84234.1 | SDO94796.1 | SAMN04489867_0728 | SAMN04489867_1005 | DNA polymerase-3 subunit epsilon. | Single-strand DNA-binding protein. | 0.401 |
SDO84234.1 | SDP12628.1 | SAMN04489867_0728 | SAMN04489867_1492 | DNA polymerase-3 subunit epsilon. | DNA polymerase III, delta subunit. | 0.934 |
SDO84234.1 | SDP53937.1 | SAMN04489867_0728 | SAMN04489867_2838 | DNA polymerase-3 subunit epsilon. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.930 |
SDO84234.1 | SDP65210.1 | SAMN04489867_0728 | SAMN04489867_3308 | DNA polymerase-3 subunit epsilon. | DNA polymerase-3 subunit gamma/tau. | 0.924 |
SDO84234.1 | SDP68364.1 | SAMN04489867_0728 | SAMN04489867_3452 | DNA polymerase-3 subunit epsilon. | DNA polymerase-3 subunit delta'. | 0.933 |
SDO85519.1 | SDO85565.1 | SAMN04489867_0762 | SAMN04489867_0763 | Hypothetical protein. | Hypothetical protein. | 0.812 |
SDO85519.1 | SDO85602.1 | SAMN04489867_0762 | SAMN04489867_0764 | Hypothetical protein. | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | 0.946 |
SDO85565.1 | SDO85519.1 | SAMN04489867_0763 | SAMN04489867_0762 | Hypothetical protein. | Hypothetical protein. | 0.812 |
SDO85565.1 | SDO85602.1 | SAMN04489867_0763 | SAMN04489867_0764 | Hypothetical protein. | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | 0.813 |
SDO85602.1 | SDO84234.1 | SAMN04489867_0764 | SAMN04489867_0728 | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | DNA polymerase-3 subunit epsilon. | 0.888 |
SDO85602.1 | SDO85519.1 | SAMN04489867_0764 | SAMN04489867_0762 | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | Hypothetical protein. | 0.946 |
SDO85602.1 | SDO85565.1 | SAMN04489867_0764 | SAMN04489867_0763 | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | Hypothetical protein. | 0.813 |
SDO85602.1 | SDO94796.1 | SAMN04489867_0764 | SAMN04489867_1005 | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | Single-strand DNA-binding protein. | 0.955 |
SDO85602.1 | SDP12628.1 | SAMN04489867_0764 | SAMN04489867_1492 | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | DNA polymerase III, delta subunit. | 0.992 |
SDO85602.1 | SDP17322.1 | SAMN04489867_0764 | SAMN04489867_1624 | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | Single-strand DNA-binding protein. | 0.955 |
SDO85602.1 | SDP52850.1 | SAMN04489867_0764 | SAMN04489867_2794 | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | Single-strand binding protein. | 0.955 |
SDO85602.1 | SDP53937.1 | SAMN04489867_0764 | SAMN04489867_2838 | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | DNA polymerase-3 subunit beta; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of re [...] | 0.991 |
SDO85602.1 | SDP65210.1 | SAMN04489867_0764 | SAMN04489867_3308 | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | DNA polymerase-3 subunit gamma/tau. | 0.988 |
SDO85602.1 | SDP68364.1 | SAMN04489867_0764 | SAMN04489867_3452 | DNA polymerase III, alpha subunit; Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | DNA polymerase-3 subunit delta'. | 0.974 |
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