STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO88329.1Putative acyl-CoA dehydrogenase. (548 aa)    
Predicted Functional Partners:
SDO87735.1
3-hydroxyacyl-CoA dehydrogenase.
  
 0.938
SDP22268.1
Electron transfer flavoprotein alpha subunit apoprotein.
  
 
 0.795
SDP22305.1
Electron transfer flavoprotein beta subunit.
  
 
 0.788
SDO67154.1
(R)-ethylmalonyl-CoA mutase.
  
 
 0.764
SDP73448.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
 0.744
SDP72526.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
  
 
 0.731
SDO65363.1
2-oxoglutarate dehydrogenase E1 component.
  
 0.723
SDO95355.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
     
 0.713
SDO59385.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.660
SDO61965.1
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 0.660
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.