STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDO95182.13-aminobutyryl-CoA ammonia-lyase. (136 aa)    
Predicted Functional Partners:
SDP45727.1
Uncharacterized conserved protein, DUF849 family.
  
  0.992
SDO95222.1
Beta-lysine 5,6-aminomutase beta subunit.
 
     0.956
SDO95259.1
Beta-lysine 5,6-aminomutase alpha subunit.
 
     0.955
SDO95439.1
L-erythro-3,5-diaminohexanoate dehydrogenase; Manually curated.
 
     0.882
SDO95487.1
L-lysine 2,3-aminomutase.
 
     0.843
SDO87735.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.781
SDP36665.1
Conserved hypothetical protein.
 
     0.781
SDP10034.1
[acyl-carrier-protein] S-malonyltransferase.
  
 0.736
SDO59385.1
2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
  0.718
SDO61965.1
Enoyl-CoA hydratase/isomerase; Belongs to the enoyl-CoA hydratase/isomerase family.
   
 
  0.718
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.