STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP00776.1Amino acid/amide ABC transporter membrane protein 2, HAAT family; Belongs to the binding-protein-dependent transport system permease family. (378 aa)    
Predicted Functional Partners:
SDP00738.1
Amino acid/amide ABC transporter membrane protein 1, HAAT family; Belongs to the binding-protein-dependent transport system permease family.
 
 0.999
SDP00809.1
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family.
 
 0.999
SDP00843.1
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family.
 
 0.999
SDP00704.1
Amino acid/amide ABC transporter substrate-binding protein, HAAT family.
 
 
 0.998
SDP21399.1
Uncharacterized conserved protein YkwD, contains CAP (CSP/antigen 5/PR1) domain.
   
   0.946
SDP64617.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
   
  0.937
SDP60472.1
Monosaccharide ABC transporter ATP-binding protein, CUT2 family.
   
  0.929
SDP10369.1
Amino acid ABC transporter ATP-binding protein, PAAT family.
 
    
 0.898
SDP30812.1
ABC transporter.
 
      0.898
SDP13389.1
Lipooligosaccharide transport system ATP-binding protein.
 
   
  0.891
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.