STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP01361.1PPOX class probable F420-dependent enzyme. (154 aa)    
Predicted Functional Partners:
coaE
dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.624
SDP01251.1
Protein of unknown function.
       0.620
SDP01291.1
Putative membrane protein.
       0.620
SDO79578.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.597
SDP01389.1
Hypothetical protein.
       0.563
SDP32843.1
F420-dependent oxidoreductase, G6PDH family.
  
     0.561
SDP48239.1
Deazaflavin-dependent oxidoreductase, nitroreductase family.
  
     0.504
SDP29209.1
Probable F420-dependent oxidoreductase, Rv1855c family.
  
     0.500
SDP21556.1
CsbD-like; Belongs to the UPF0337 (CsbD) family.
  
    0.494
SDO97249.1
Probable F420-dependent oxidoreductase, Rv3520c family.
  
     0.467
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.