STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP03431.1Flavin-dependent oxidoreductase, luciferase family (includes alkanesulfonate monooxygenase SsuD and methylene tetrahydromethanopterin reductase). (269 aa)    
Predicted Functional Partners:
SDP03457.1
Hypothetical protein.
  
    0.776
SDP03494.1
Hypothetical protein.
       0.773
SDP03398.1
N-acetylglucosaminyl deacetylase, LmbE family.
       0.732
SDP03541.1
Hypothetical protein.
       0.615
SDP03585.1
Oxidoreductase molybdopterin binding domain-containing protein.
    
  0.610
SDP47399.1
TIGR03086 family protein.
  
     0.586
SDO89964.1
FMN reductase.
  
  0.581
SDP33759.1
SpoIID/LytB domain protein.
  
     0.535
SDP17218.1
Probable F420-dependent oxidoreductase, Rv1855c family.
  
     0.515
SDP33791.1
Ig-like domain-containing protein.
  
     0.514
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.