STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP11696.1Acetyltransferase (GNAT) family protein. (298 aa)    
Predicted Functional Partners:
SDP26104.1
Hypothetical protein.
  
     0.732
SDP53195.1
Fibronectin type III domain-containing protein.
  
     0.702
SDP27081.1
Hypothetical protein.
  
     0.660
SDP25541.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.636
SDP26139.1
Hypothetical protein.
  
     0.621
SDP72655.1
Urease subunit beta.
   
  0.618
SDP67968.1
Hypothetical protein.
  
     0.616
SDP11627.1
Predicted arabinose efflux permease, MFS family.
       0.540
SDP11659.1
Helix-turn-helix domain-containing protein.
       0.540
SDP11732.1
Hypothetical protein.
       0.504
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.