STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP15123.1Energy-coupling factor transport system ATP-binding protein. (566 aa)    
Predicted Functional Partners:
SDP15085.1
Energy-coupling factor transport system permease protein.
 0.999
SDP15166.1
Energy-coupling factor transport system substrate-specific component.
  0.997
SDP15043.1
Hypothetical protein.
 
    0.964
SDP15004.1
Prenyltransferase and squalene oxidase repeat-containing protein.
 
    0.952
SDP50078.1
Energy-coupling factor transport system ATP-binding protein; Non-canonical start codon; manually curated.
 
0.813
SDP19707.1
Cobalt/nickel transport system permease protein.
  
 0.777
SDP15196.1
Glycolate oxidase.
       0.773
SDO95355.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
   
    0.771
SDP19748.1
Cobalt/nickel transport system ATP-binding protein; Part of an ABC transporter complex. Responsible for energy coupling to the transport system.
 
 
0.730
SDO95520.1
Biotin transport system substrate-specific component.
    
  0.674
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.