STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP22210.1Cysteine desulfurase. (395 aa)    
Predicted Functional Partners:
SDO99491.1
Nitrogen fixation protein NifU.
  
 0.999
SDO83561.1
TusA-related sulfurtransferase; Belongs to the sulfur carrier protein TusA family.
   
 0.988
SDP32650.1
Ferredoxin-NADP reductase.
  
 0.960
SDP73354.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaE.
  
 0.960
SDO61217.1
Adenylyltransferase and sulfurtransferase.
 
 
 0.947
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis; Belongs to the acyl carrier protein (ACP) family.
    
 
 0.945
selD
Selenophosphate synthase; Synthesizes selenophosphate from selenide and ATP.
   
 0.940
mnmA
tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase; Catalyzes the 2-thiolation of uridine at the wobble position (U34) of tRNA, leading to the formation of s(2)U34.
 
  
 0.894
SDO61868.1
Hypothetical protein.
   
 0.886
SDP10832.1
Thiosulfate/3-mercaptopyruvate sulfurtransferase.
   
 0.885
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.