STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP24177.1Hypothetical protein. (158 aa)    
Predicted Functional Partners:
SDP24210.1
Hypothetical protein.
 
     0.956
SDP24148.1
Putative Flp pilus-assembly TadE/G-like.
 
     0.945
SDP24241.1
Hypothetical protein.
 
     0.927
SDP24308.1
Tight adherence protein B.
 
     0.920
SDP24277.1
Tight adherence protein C.
 
     0.919
SDP25168.1
MinD-like ATPase involved in chromosome partitioning or flagellar assembly.
  
     0.774
SDP25206.1
Hypothetical protein.
  
     0.773
SDP24351.1
Pilus assembly protein CpaF.
 
     0.769
SDP25274.1
Hypothetical protein.
  
     0.767
SDP25347.1
Hypothetical protein; Non-canonical start codon; manually curated.
  
     0.757
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.