STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pxpAUPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate. (256 aa)    
Predicted Functional Partners:
SDP24760.1
Sensor histidine kinase inhibitor, KipI family.
 
 0.999
SDP24792.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
 
 0.999
SDP24601.1
Glutamate dehydrogenase.
    
  0.869
SDO68940.1
Glutamine synthetase.
   
 
  0.810
SDO81837.1
L-glutamine synthetase.
   
 
  0.810
SDP08342.1
Glutamine synthetase.
   
 
  0.810
SDP24661.1
Hypothetical protein.
       0.773
SDP24694.1
Hypothetical protein.
       0.773
SDP70788.1
L-proline dehydrogenase.
   
 
  0.728
SDP30873.1
Amidohydrolase.
  
 
  0.709
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.