STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP24822.1Protein of unknown function. (163 aa)    
Predicted Functional Partners:
SDP25347.1
Hypothetical protein; Non-canonical start codon; manually curated.
  
     0.577
pxpA
UPF0271 protein; Catalyzes the cleavage of 5-oxoproline to form L-glutamate coupled to the hydrolysis of ATP to ADP and inorganic phosphate.
       0.574
SDP24661.1
Hypothetical protein.
       0.566
SDP24694.1
Hypothetical protein.
       0.566
SDP24760.1
Sensor histidine kinase inhibitor, KipI family.
       0.566
SDP24792.1
Biotin-dependent carboxylase uncharacterized domain-containing protein.
       0.566
SDP28316.1
TIGR03089 family protein.
  
     0.547
SDP39218.1
Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains.
  
     0.475
SDO58870.1
Hypothetical protein.
  
     0.468
SDP24148.1
Putative Flp pilus-assembly TadE/G-like.
  
     0.459
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.