STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP28034.1Hypothetical protein. (353 aa)    
Predicted Functional Partners:
SDP28069.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.949
SDP28104.1
Glycosyltransferase involved in cell wall bisynthesis.
 
 
  0.935
SDP27997.1
Methyltransferase domain-containing protein.
 
     0.817
SDP28149.1
Transcriptional regulator, AbiEi antitoxin, Type IV TA system.
 
     0.611
SDP24998.1
Hypothetical protein.
  
     0.542
SDO74082.1
Barstar, RNAse (barnase) inhibitor.
  
     0.473
SDP52777.1
Protein of unknown function.
  
     0.443
SDP53275.1
FHA domain-containing protein.
  
     0.432
SDP15372.1
Hypothetical protein.
  
     0.421
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.