Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO66008.1 | SDO81418.1 | SAMN04489867_0262 | SAMN04489867_0656 | HAMP domain-containing protein. | Histidine kinase-like ATPase domain-containing protein. | 0.796 |
SDO66008.1 | SDO88576.1 | SAMN04489867_0262 | SAMN04489867_0855 | HAMP domain-containing protein. | PAS domain S-box-containing protein. | 0.943 |
SDO66008.1 | SDO88923.1 | SAMN04489867_0262 | SAMN04489867_0865 | HAMP domain-containing protein. | Hypothetical protein. | 0.910 |
SDO66008.1 | SDP29399.1 | SAMN04489867_0262 | SAMN04489867_1979 | HAMP domain-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.849 |
SDO66008.1 | SDP42955.1 | SAMN04489867_0262 | SAMN04489867_2428 | HAMP domain-containing protein. | Two-component system, OmpR family, sensor kinase. | 0.432 |
SDO66008.1 | SDP45282.1 | SAMN04489867_0262 | SAMN04489867_2507 | HAMP domain-containing protein. | Two-component system, OmpR family, sensor histidine kinase SenX3. | 0.447 |
SDO66008.1 | SDP47427.1 | SAMN04489867_0262 | SAMN04489867_2584 | HAMP domain-containing protein. | Hypothetical protein. | 0.976 |
SDO66008.1 | SDP63401.1 | SAMN04489867_0262 | SAMN04489867_3226 | HAMP domain-containing protein. | Signal transduction histidine kinase. | 0.985 |
SDO81418.1 | SDO66008.1 | SAMN04489867_0656 | SAMN04489867_0262 | Histidine kinase-like ATPase domain-containing protein. | HAMP domain-containing protein. | 0.796 |
SDO81418.1 | SDO88576.1 | SAMN04489867_0656 | SAMN04489867_0855 | Histidine kinase-like ATPase domain-containing protein. | PAS domain S-box-containing protein. | 0.998 |
SDO81418.1 | SDO88923.1 | SAMN04489867_0656 | SAMN04489867_0865 | Histidine kinase-like ATPase domain-containing protein. | Hypothetical protein. | 0.990 |
SDO81418.1 | SDP07571.1 | SAMN04489867_0656 | SAMN04489867_1352 | Histidine kinase-like ATPase domain-containing protein. | PAS domain S-box-containing protein. | 0.772 |
SDO81418.1 | SDP29366.1 | SAMN04489867_0656 | SAMN04489867_1978 | Histidine kinase-like ATPase domain-containing protein. | Signal transduction histidine kinase. | 0.831 |
SDO81418.1 | SDP29399.1 | SAMN04489867_0656 | SAMN04489867_1979 | Histidine kinase-like ATPase domain-containing protein. | DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain. | 0.861 |
SDO81418.1 | SDP42955.1 | SAMN04489867_0656 | SAMN04489867_2428 | Histidine kinase-like ATPase domain-containing protein. | Two-component system, OmpR family, sensor kinase. | 0.805 |
SDO81418.1 | SDP45282.1 | SAMN04489867_0656 | SAMN04489867_2507 | Histidine kinase-like ATPase domain-containing protein. | Two-component system, OmpR family, sensor histidine kinase SenX3. | 0.807 |
SDO81418.1 | SDP47427.1 | SAMN04489867_0656 | SAMN04489867_2584 | Histidine kinase-like ATPase domain-containing protein. | Hypothetical protein. | 0.999 |
SDO81418.1 | SDP63401.1 | SAMN04489867_0656 | SAMN04489867_3226 | Histidine kinase-like ATPase domain-containing protein. | Signal transduction histidine kinase. | 0.999 |
SDO88576.1 | SDO66008.1 | SAMN04489867_0855 | SAMN04489867_0262 | PAS domain S-box-containing protein. | HAMP domain-containing protein. | 0.943 |
SDO88576.1 | SDO81418.1 | SAMN04489867_0855 | SAMN04489867_0656 | PAS domain S-box-containing protein. | Histidine kinase-like ATPase domain-containing protein. | 0.998 |
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