STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP36210.1Hypothetical protein. (250 aa)    
Predicted Functional Partners:
SDP21692.1
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
   
 
 0.954
SDP57131.1
Tetratricopeptide repeat-containing protein.
   
 
 0.950
SDP39218.1
Uncharacterized conserved protein YabE, contains G5 and tandem DUF348 domains.
    
 0.891
SDP63401.1
Signal transduction histidine kinase.
  
 
 0.753
SDO88923.1
Hypothetical protein.
  
 
  0.679
SDP31296.1
2'-5' RNA ligase.
  
     0.550
secE
Preprotein translocase subunit SecE; Essential subunit of the Sec protein translocation channel SecYEG. Clamps together the 2 halves of SecY. May contact the channel plug during translocation.
  
     0.522
SDP36238.1
PhoH-like ATPase.
       0.513
SDP33604.1
uracil-DNA glycosylase, family 4.
   
   0.437
SDP38303.1
Hypothetical protein.
    
  0.430
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.