Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SDO73693.1 | SDP38241.1 | SAMN04489867_0454 | SAMN04489867_2256 | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | Threonine/homoserine efflux transporter RhtA. | 0.528 |
SDP34364.1 | SDP38241.1 | SAMN04489867_2131 | SAMN04489867_2256 | Protein of unknown function. | Threonine/homoserine efflux transporter RhtA. | 0.508 |
SDP34364.1 | SDP38275.1 | SAMN04489867_2131 | SAMN04489867_2257 | Protein of unknown function. | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | 0.468 |
SDP38241.1 | SDO73693.1 | SAMN04489867_2256 | SAMN04489867_0454 | Threonine/homoserine efflux transporter RhtA. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.528 |
SDP38241.1 | SDP34364.1 | SAMN04489867_2256 | SAMN04489867_2131 | Threonine/homoserine efflux transporter RhtA. | Protein of unknown function. | 0.508 |
SDP38241.1 | SDP38275.1 | SAMN04489867_2256 | SAMN04489867_2257 | Threonine/homoserine efflux transporter RhtA. | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | 0.912 |
SDP38241.1 | SDP43559.1 | SAMN04489867_2256 | SAMN04489867_2451 | Threonine/homoserine efflux transporter RhtA. | Lysophospholipase L1. | 0.422 |
SDP38241.1 | SDP64106.1 | SAMN04489867_2256 | SAMN04489867_3253 | Threonine/homoserine efflux transporter RhtA. | Hypothetical protein. | 0.497 |
SDP38241.1 | pheT | SAMN04489867_2256 | SAMN04489867_1350 | Threonine/homoserine efflux transporter RhtA. | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.415 |
SDP38241.1 | rplY | SAMN04489867_2256 | SAMN04489867_2255 | Threonine/homoserine efflux transporter RhtA. | Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | 0.467 |
SDP38275.1 | SDP34364.1 | SAMN04489867_2257 | SAMN04489867_2131 | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | Protein of unknown function. | 0.468 |
SDP38275.1 | SDP38241.1 | SAMN04489867_2257 | SAMN04489867_2256 | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | Threonine/homoserine efflux transporter RhtA. | 0.912 |
SDP38275.1 | SDP64106.1 | SAMN04489867_2257 | SAMN04489867_3253 | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | Hypothetical protein. | 0.497 |
SDP43559.1 | SDP38241.1 | SAMN04489867_2451 | SAMN04489867_2256 | Lysophospholipase L1. | Threonine/homoserine efflux transporter RhtA. | 0.422 |
SDP64106.1 | SDP38241.1 | SAMN04489867_3253 | SAMN04489867_2256 | Hypothetical protein. | Threonine/homoserine efflux transporter RhtA. | 0.497 |
SDP64106.1 | SDP38275.1 | SAMN04489867_3253 | SAMN04489867_2257 | Hypothetical protein. | Conserved protein containing a Zn-ribbon-like motif, possibly RNA-binding. | 0.497 |
pheT | SDP38241.1 | SAMN04489867_1350 | SAMN04489867_2256 | phenylalanyl-tRNA synthetase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | Threonine/homoserine efflux transporter RhtA. | 0.415 |
rplY | SDP38241.1 | SAMN04489867_2255 | SAMN04489867_2256 | Large subunit ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance. Belongs to the bacterial ribosomal protein bL25 family. CTC subfamily. | Threonine/homoserine efflux transporter RhtA. | 0.467 |