STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP41641.1Oligo-1,6-glucosidase. (572 aa)    
Predicted Functional Partners:
SDP23315.1
Predicted trehalose synthase.
 
 0.992
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
  
 0.928
SDO68736.1
Amino acid transporter.
   
  0.831
SDO85874.1
Amino acid transporter.
   
  0.831
SDO86831.1
Amino acid transporter; Manually curated.
   
  0.831
SDP10689.1
Amino acid exporter, AAE family.
   
  0.831
SDP64181.1
Amino acid/polyamine/organocation transporter, APC superfamily.
   
  0.831
SDO92657.1
4-alpha-glucanotransferase.
 
 
 0.785
SDO83020.1
Beta-fructofuranosidase.
 
 
 0.783
SDP31374.1
Alpha-galactosidase.
  
 
 0.782
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.