STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP41980.1Cellobiose phosphorylase. (1127 aa)    
Predicted Functional Partners:
SDP41926.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
   
 0.949
SDP41953.1
Beta-glucosidase.
 
  
 0.887
SDO56410.1
Alpha-1,6-glucosidases, pullulanase-type; Belongs to the glycosyl hydrolase 13 family.
   
 
 0.731
SDP42008.1
Peptide/nickel transport system substrate-binding protein.
 
     0.675
SDO56322.1
Hypothetical protein.
  
  
  0.601
SDO67193.1
PA domain-containing protein; Belongs to the peptidase S8 family.
  
    0.576
SDP42087.1
Peptide/nickel transport system ATP-binding protein; Belongs to the ABC transporter superfamily.
 
     0.560
SDP51536.1
Protein of unknown function.
 
    0.531
SDP42060.1
Peptide/nickel transport system permease protein.
 
     0.486
SDP41531.1
Alpha-glucosidase, glycosyl hydrolase family GH31; Belongs to the glycosyl hydrolase 31 family.
     
 0.484
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.