Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SDP38538.1 | SDP42853.1 | SAMN04489867_2266 | SAMN04489867_2424 | FHA domain-containing protein. | hydroxymethylglutaryl-CoA lyase. | 0.582 |
| SDP38538.1 | SDP42983.1 | SAMN04489867_2266 | SAMN04489867_2429 | FHA domain-containing protein. | Putative serine protease PepD. | 0.693 |
| SDP38538.1 | SDP44183.1 | SAMN04489867_2266 | SAMN04489867_2471 | FHA domain-containing protein. | Catalase; Serves to protect cells from the toxic effects of hydrogen peroxide. | 0.683 |
| SDP38538.1 | alaS | SAMN04489867_2266 | SAMN04489867_1302 | FHA domain-containing protein. | alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two- step reaction: alanine is first activated by ATP to form Ala-AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain. | 0.646 |
| SDP38538.1 | arc | SAMN04489867_2266 | SAMN04489867_1054 | FHA domain-containing protein. | Proteasome-associated ATPase; ATPase which is responsible for recognizing, binding, unfolding and translocation of pupylated proteins into the bacterial 20S proteasome core particle. May be essential for opening the gate of the 20S proteasome via an interaction with its C-terminus, thereby allowing substrate entry and access to the site of proteolysis. Thus, the C-termini of the proteasomal ATPase may function like a 'key in a lock' to induce gate opening and therefore regulate proteolysis. | 0.899 |
| SDP38538.1 | glpK | SAMN04489867_2266 | SAMN04489867_0135 | FHA domain-containing protein. | Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family. | 0.847 |
| SDP38538.1 | prcA | SAMN04489867_2266 | SAMN04489867_1046 | FHA domain-containing protein. | Proteasome alpha subunit; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1A family. | 0.706 |
| SDP38538.1 | prcB | SAMN04489867_2266 | SAMN04489867_1047 | FHA domain-containing protein. | Proteasome endopeptidase complex, beta component Threonine peptidase. MEROPS family T01B; Component of the proteasome core, a large protease complex with broad specificity involved in protein degradation. Belongs to the peptidase T1B family. | 0.706 |
| SDP42853.1 | SDP38538.1 | SAMN04489867_2424 | SAMN04489867_2266 | hydroxymethylglutaryl-CoA lyase. | FHA domain-containing protein. | 0.582 |
| SDP42853.1 | SDP42932.1 | SAMN04489867_2424 | SAMN04489867_2427 | hydroxymethylglutaryl-CoA lyase. | Two-component system, OmpR family, response regulator. | 0.477 |
| SDP42853.1 | SDP42955.1 | SAMN04489867_2424 | SAMN04489867_2428 | hydroxymethylglutaryl-CoA lyase. | Two-component system, OmpR family, sensor kinase. | 0.477 |
| SDP42853.1 | SDP42983.1 | SAMN04489867_2424 | SAMN04489867_2429 | hydroxymethylglutaryl-CoA lyase. | Putative serine protease PepD. | 0.695 |
| SDP42932.1 | SDP42853.1 | SAMN04489867_2427 | SAMN04489867_2424 | Two-component system, OmpR family, response regulator. | hydroxymethylglutaryl-CoA lyase. | 0.477 |
| SDP42932.1 | SDP42955.1 | SAMN04489867_2427 | SAMN04489867_2428 | Two-component system, OmpR family, response regulator. | Two-component system, OmpR family, sensor kinase. | 0.973 |
| SDP42932.1 | SDP42983.1 | SAMN04489867_2427 | SAMN04489867_2429 | Two-component system, OmpR family, response regulator. | Putative serine protease PepD. | 0.695 |
| SDP42955.1 | SDP42853.1 | SAMN04489867_2428 | SAMN04489867_2424 | Two-component system, OmpR family, sensor kinase. | hydroxymethylglutaryl-CoA lyase. | 0.477 |
| SDP42955.1 | SDP42932.1 | SAMN04489867_2428 | SAMN04489867_2427 | Two-component system, OmpR family, sensor kinase. | Two-component system, OmpR family, response regulator. | 0.973 |
| SDP42955.1 | SDP42983.1 | SAMN04489867_2428 | SAMN04489867_2429 | Two-component system, OmpR family, sensor kinase. | Putative serine protease PepD. | 0.795 |
| SDP42983.1 | SDP38538.1 | SAMN04489867_2429 | SAMN04489867_2266 | Putative serine protease PepD. | FHA domain-containing protein. | 0.693 |
| SDP42983.1 | SDP42853.1 | SAMN04489867_2429 | SAMN04489867_2424 | Putative serine protease PepD. | hydroxymethylglutaryl-CoA lyase. | 0.695 |
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