STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP49063.1Signal transduction histidine kinase. (409 aa)    
Predicted Functional Partners:
SDP49029.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  0.972
SDO74303.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.877
SDP01002.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.876
SDP25795.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
  
  0.876
SDP68320.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.876
SDP17183.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.875
SDP39326.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.875
SDP35815.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.874
SDP41407.1
DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains.
 
  0.874
SDP25613.1
Two component transcriptional regulator, LuxR family.
 
  0.873
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.