STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP57180.1Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. (181 aa)    
Predicted Functional Partners:
SDP55391.1
Fructosamine-3-kinase.
     0.849
SDP12295.1
Protein tyrosine/serine phosphatase.
     
 0.844
SDP57208.1
Zn-dependent protease with chaperone function.
       0.773
SDP45840.1
Protein-tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 
0.766
SDP59969.1
Rhodanese-related sulfurtransferase.
    
   0.684
SDP62654.1
Rhodanese-related sulfurtransferase.
    
   0.684
SDP63124.1
Glyoxylase, beta-lactamase superfamily II.
    
   0.684
SDO96903.1
Haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED.
   
 
  0.683
SDP38159.1
Undecaprenyl-phosphate galactose phosphotransferase, WbaP/exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
 
 0.662
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
    
  0.609
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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