STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP57235.1Predicted transcriptional regulator. (140 aa)    
Predicted Functional Partners:
SDP57208.1
Zn-dependent protease with chaperone function.
 
 
  0.937
SDP51870.1
Copper chaperone CopZ.
  
  
 0.852
SDP57309.1
Cytochrome bd-I ubiquinol oxidase subunit 2 apoprotein.
       0.818
SDP57284.1
ATP-binding cassette, subfamily C, CydD.
       0.812
SDP57262.1
ATP-binding cassette, subfamily C, CydC.
       0.807
SDP57332.1
Cytochrome bd-I ubiquinol oxidase subunit 1 apoprotein.
       0.723
SDP57180.1
Protein tyrosine phosphatase; Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
       0.584
SDO97446.1
Predicted protein.
     
 0.493
SDP53691.1
N-acetylmuramoyl-L-alanine amidase.
    
  0.455
SDP57359.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
       0.453
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.