STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP57745.1ABC-2 type transport system permease protein. (304 aa)    
Predicted Functional Partners:
SDP57773.1
ABC-2 type transport system ATP-binding protein.
   0.975
SDP57716.1
ABC-2 type transport system ATP-binding protein.
   0.972
SDP57690.1
ABC-2 type transport system permease protein.
 
     0.956
SDP57798.1
Drug resistance transporter, EmrB/QacA subfamily; Belongs to the major facilitator superfamily.
       0.533
SDO56768.1
ABC-2 type transport system ATP-binding protein.
   
   0.504
SDO65401.1
ABC-2 family transporter protein.
   
   0.504
SDO65436.1
ABC-2 type transport system ATP-binding protein.
 
 
   0.504
SDO74263.1
Putative ABC transport system ATP-binding protein.
   
   0.504
SDO89067.1
ABC-2 type transport system ATP-binding protein.
   
   0.504
SDO99853.1
ABC-2 type transport system ATP-binding protein.
 
 
   0.504
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.