STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP66668.1Transcriptional regulator, PaaX family. (289 aa)    
Predicted Functional Partners:
SDP66540.1
anthraniloyl-CoA monooxygenase.
 
     0.737
SDP66561.1
2-aminobenzoate-CoA ligase.
 
     0.722
SDP66646.1
Enamine deaminase RidA, house cleaning of reactive enamine intermediates, YjgF/YER057c/UK114 family.
 
     0.543
SDP66692.1
Malate dehydrogenase (oxaloacetate-decarboxylating).
       0.540
SDP66712.1
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
       0.540
SDP66602.1
Uncharacterized protein, RmlC-like cupin domain.
 
     0.523
SDP70120.1
phenylacetate-CoA ligase; Catalyzes the activation of phenylacetic acid (PA) to phenylacetyl-CoA (PA-CoA).
 
   
 0.494
SDO77801.1
NAD-dependent protein deacetylase, SIR2 family.
   
    0.491
SDP73423.1
ring-1,2-phenylacetyl-CoA epoxidase subunit PaaA.
 
  
 0.455
SDP66520.1
acyl-CoA thioester hydrolase.
 
     0.448
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.