STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP66865.12-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase. (164 aa)    
Predicted Functional Partners:
SDP66888.1
5-hydroxyisourate hydrolase; Belongs to the transthyretin family. 5-hydroxyisourate hydrolase subfamily.
 
 0.996
SDP67051.1
Allantoinase.
 
  
  0.953
SDP66794.1
Urate oxidase; Catalyzes the oxidation of uric acid to 5-hydroxyisourate, which is further processed to form (S)-allantoin.
 
  
 0.951
SDP66839.1
OHCU decarboxylase.
    0.899
SDP66913.1
Cytosine/adenosine deaminase.
 
     0.887
SDP50216.1
N-carbamoyl-L-amino-acid hydrolase.
   
  0.856
SDP67150.1
Allantoin racemase.
 
  
  0.831
SDP66712.1
Citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
     0.822
SDP72655.1
Urease subunit beta.
    
  0.736
SDP66814.1
Xanthine permease; Manually curated.
    0.722
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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