STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP68637.1Dienelactone hydrolase. (191 aa)    
Predicted Functional Partners:
SDP68661.1
Uncharacterized protein, UPF0303 family; Belongs to the UPF0303 family.
  
    0.565
gcvP
Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
    0.450
SDO78161.1
Acetyltransferase (GNAT) family protein.
  
     0.443
SDP24892.1
Pimeloyl-ACP methyl ester carboxylesterase.
  
 0.439
SDP68690.1
Sugar kinase of the NBD/HSP70 family, may contain an N-terminal HTH domain.
       0.430
SDP33446.1
Alpha/beta hydrolase fold.
 
 
 0.425
SDO75991.1
Putative esterase.
  
 
  0.416
SDP39644.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.