STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP72863.13-hydroxyisobutyrate dehydrogenase. (302 aa)    
Predicted Functional Partners:
SDO87735.1
3-hydroxyacyl-CoA dehydrogenase.
  
 
 0.751
SDP73448.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
 
  0.735
SDP72889.1
Protein of unknown function.
       0.553
SDP43504.1
Protein of unknown function.
  
     0.453
SDP66983.1
Tartronate-semialdehyde synthase; Belongs to the TPP enzyme family.
  
 
 0.449
SDP66937.1
Hydroxypyruvate isomerase; Belongs to the hyi family.
  
 
 0.432
SDP04139.1
Cutinase.
  
     0.430
SDP72913.1
Hypothetical protein.
 
     0.425
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.