STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SDP74612.1Protein N-acetyltransferase, RimJ/RimL family. (191 aa)    
Predicted Functional Partners:
SDP74626.1
FMN-dependent dehydrogenase, includes L-lactate dehydrogenase and type II isopentenyl diphosphate isomerase.
       0.773
SDP14523.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.756
SDO95355.1
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
    
 0.738
SDP68248.1
Protein N-acetyltransferase, RimJ/RimL family.
  
     0.718
SDP02583.1
Glutamate synthase (NADH) large subunit.
   
 
  0.687
SDP72526.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
    
  0.673
SDP12785.1
Protein N-acetyltransferase, RimJ/RimL family.
 
     0.662
SDP74648.1
Hypothetical protein.
       0.506
SDP22714.1
Predicted kinase, aminoglycoside phosphotransferase (APT) family.
  
 
   0.495
SDP73448.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
  0.471
Your Current Organism:
Phycicoccus dokdonensis
NCBI taxonomy Id: 443156
Other names: CCUG 54521, DSM 22329, KCTC 19248, P. dokdonensis, Phycicoccus dokdonensis Yoon et al. 2008, strain DS-8
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.