UBE2V2 protein (Erythrura gouldiae) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

UBE2V2

UBIQUITIN_CONJUGAT_2 domain-containing protein. (144 aa)

Predicted Functional Partners:

DV515_00004586

0.999

BIRC6

0.980

DV515_00004256

0.978

UBA52

0.949

UBE2K

0.910

REV3L

0.890

DV515_00012350

0.888

ENSEGOP00005022707

0.885

DV515_00000336

0.883

PCNA

0.876

Your Current Organism:

Erythrura gouldiae

NCBI taxonomy Id: 44316
Other names: Chloebia gouldiae, Chloebia gouldiae gouldiae, E. gouldiae, Gouldian finch

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
BIRC6	DV515_00000336	ENSEGOP00005010172	ENSEGOP00005000414	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.747
BIRC6	DV515_00004256	ENSEGOP00005010172	ENSEGOP00005003984	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.977
BIRC6	DV515_00004586	ENSEGOP00005010172	ENSEGOP00005017511	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.771
BIRC6	DV515_00012350	ENSEGOP00005010172	ENSEGOP00005022709	Uncharacterized protein.	Uncharacterized protein.	0.986
BIRC6	ENSEGOP00005022707	ENSEGOP00005010172	ENSEGOP00005022707	Uncharacterized protein.	annotation not available	0.986
BIRC6	PCNA	ENSEGOP00005010172	ENSEGOP00005016695	Uncharacterized protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.595
BIRC6	UBA52	ENSEGOP00005010172	ENSEGOP00005016007	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.986
BIRC6	UBE2K	ENSEGOP00005010172	ENSEGOP00005006410	Uncharacterized protein.	Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.	0.688
BIRC6	UBE2V2	ENSEGOP00005010172	ENSEGOP00005000302	Uncharacterized protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.980
DV515_00000336	BIRC6	ENSEGOP00005000414	ENSEGOP00005010172	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.747
DV515_00000336	DV515_00004256	ENSEGOP00005000414	ENSEGOP00005003984	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.771
DV515_00000336	DV515_00004586	ENSEGOP00005000414	ENSEGOP00005017511	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.	0.788
DV515_00000336	DV515_00012350	ENSEGOP00005000414	ENSEGOP00005022709	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein.	0.718
DV515_00000336	ENSEGOP00005022707	ENSEGOP00005000414	ENSEGOP00005022707	UBIQUITIN_CONJUGAT_2 domain-containing protein.	annotation not available	0.716
DV515_00000336	PCNA	ENSEGOP00005000414	ENSEGOP00005016695	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.	0.565
DV515_00000336	UBA52	ENSEGOP00005000414	ENSEGOP00005016007	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Ubiquitin-like domain-containing protein.	0.757
DV515_00000336	UBE2K	ENSEGOP00005000414	ENSEGOP00005006410	UBIQUITIN_CONJUGAT_2 domain-containing protein.	Uncharacterized protein; Belongs to the ubiquitin-conjugating enzyme family.	0.722
DV515_00000336	UBE2V2	ENSEGOP00005000414	ENSEGOP00005000302	UBIQUITIN_CONJUGAT_2 domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.883
DV515_00004256	BIRC6	ENSEGOP00005003984	ENSEGOP00005010172	Ubiquitin-like domain-containing protein.	Uncharacterized protein.	0.977
DV515_00004256	DV515_00000336	ENSEGOP00005003984	ENSEGOP00005000414	Ubiquitin-like domain-containing protein.	UBIQUITIN_CONJUGAT_2 domain-containing protein.	0.771